Skip to content
AI News HubLIVE
Original source2 min read

Solving the Needle-in-a-Haystack Problem in Mammography Vision-Language Model with Differentiable Subset Sampling

Summary

TopKSigLIP, a mammography vision-language model, addresses standard CLIP's poor zero-shot performance in clinical tasks by tackling high-resolution imaging and report homogeneity. It uses a TopK-Patch module to learnably sample high-res lesion-suspect patches and a Sup-sigmoid loss with soft labels from structured data. The model outperforms existing open-source medical VLMs on internal/external benchmarks and offers built-in lesion localization.

SourcearXiv Computer VisionAuthor: Young Seok Jeon, Beatrice Brown-Mulry, Rohan Satya Isaac, Anjana Dissanayaka, Theo Dapamede, Mohammadreza Chavoshi, Judy Gichoya, Hari Trivedi
Solving the Needle-in-a-Haystack Problem in Mammography Vision-Language Model with Differentiable Subset Sampling
Report an error

The correction channel is not available yet. You can copy the article reference below for later.

Correction instructions
Read article

[Submitted on 2 Sep 2026]

Title:Solving the Needle-in-a-Haystack Problem in Mammography Vision-Language Model with Differentiable Subset Sampling

View a PDF of the paper titled Solving the Needle-in-a-Haystack Problem in Mammography Vision-Language Model with Differentiable Subset Sampling, by Young Seok Jeon and 7 other authors

View PDF HTML (experimental)

Abstract:There is growing interest in adopting CLIP-style vision--language model (VLM) pretraining for mammography. However, models that directly employ the standard CLIP architecture and training objective exhibit limited zero-shot performance in clinically important tasks such as cancer, finding-type, and BI-RADS predictions. We argue that this underwhelming performance is due to neglecting two characteristics of mammography data: (1) its high-res nature, and (2) homogeneity of radiology reports, largely driven by a predominance of negative/benign findings on examinations. We propose TopKSigLIP, a VLM designed to address these two limitations through a novel architecture and learning objectives. Instead of downscaling high-res mammography images to satisfy GPU memory constraints, TopKSigLIP introduces TopK-Patch module that learns to sample a sparse set of high-res patches likely to contain lesions, sidestepping the resolution--batch size tradeoff of VLM training. The sampled patch locations additionally serve as a built-in localization tool. To address report homogeneity, we replace the contrastive loss, which falsely repels semantically similar pairs, with a Sup-sigmoid loss. Sup-sigmoid loss extends the sigmoid loss from SigLIP with soft labels derived from structured data. TopKSigLIP outperforms existing open-source mammography and general medical VLMs on both internal and external benchmarks on density assessment, BI-RADS classification, finding subtyping, and cancer prediction under zero-shot evaluation. TopKSigLIP remains competitive under linear probing despite using a significantly smaller vision encoder and smaller training batches than baselines. The TopK-Patch module additionally achieves superior lesion localization over post-hoc Grad-CAM. Code and weights are made public:this https URL.

Subjects:

Computer Vision and Pattern Recognition (cs.CV)

Cite as: arXiv:2609.03085 [cs.CV]

(or arXiv:2609.03085v1 [cs.CV] for this version)

https://doi.org/10.48550/arXiv.2609.03085

arXiv-issued DOI via DataCite (pending registration)

Submission history

From: Young Seok Jeon [view email] [v1] Wed, 2 Sep 2026 18:59:00 UTC (6,047 KB)

Full-text links:

Access Paper:

View a PDF of the paper titled Solving the Needle-in-a-Haystack Problem in Mammography Vision-Language Model with Differentiable Subset Sampling, by Young Seok Jeon and 7 other authors

View PDF

HTML (experimental)

TeX Source

view license

Current browse context:

cs.CV

new | recent | 2026-09

Change to browse by:

cs

References & Citations

NASA ADS

Google Scholar

Semantic Scholar

Loading...

Data provided by:

Bibliographic Tools

Bibliographic and Citation Tools

Bibliographic Explorer Toggle

Bibliographic Explorer (What is the Explorer?)

Connected Papers Toggle

Connected Papers (What is Connected Papers?)

Litmaps Toggle

Litmaps (What is Litmaps?)

scite.ai Toggle

scite Smart Citations (What are Smart Citations?)

Code, Data, Media

Code, Data and Media Associated with this Article

alphaXiv Toggle

alphaXiv (What is alphaXiv?)

Links to Code Toggle

CatalyzeX Code Finder for Papers (What is CatalyzeX?)

DagsHub Toggle

DagsHub (What is DagsHub?)

GotitPub Toggle

Gotit.pub (What is GotitPub?)

Huggingface Toggle

Hugging Face (What is Huggingface?)

ScienceCast Toggle

ScienceCast (What is ScienceCast?)

Demos

Demos

Replicate Toggle

Replicate (What is Replicate?)

Spaces Toggle

Hugging Face Spaces (What is Spaces?)

Spaces Toggle

TXYZ.AI (What is TXYZ.AI?)

Related Papers

Recommenders and Search Tools

Link to Influence Flower

Influence Flower (What are Influence Flowers?)

Core recommender toggle

CORE Recommender (What is CORE?)

Author

Venue

Institution

Topic

About arXivLabs

arXivLabs: experimental projects with community collaborators

arXivLabs is a framework that allows collaborators to develop and share new arXiv features directly on our website.

Both individuals and organizations that work with arXivLabs have embraced and accepted our values of openness, community, excellence, and user data privacy. arXiv is committed to these values and only works with partners that adhere to them.

Have an idea for a project that will add value for arXiv's community? Learn more about arXivLabs.

Which authors of this paper are endorsers? | Disable MathJax (What is MathJax?)

Key points and analysis

Article intelligence

EngineersAdvanced

Key points

  • TopKSigLIP tackles two overlooked traits of mammography data: very high resolution and homogeneous radiology reports dominated by negative findings.
  • The TopK-Patch module learns to sample a sparse set of high-resolution patches likely to contain lesions, avoiding the resolution-batch size tradeoff and enabling built-in localization.
  • Sup-sigmoid loss replaces contrastive loss with soft labels derived from structured data, preventing false repulsion of semantically similar image-report pairs.
  • Across zero-shot density, BI-RADS, finding subtype, and cancer prediction benchmarks, TopKSigLIP surpasses existing open-source mammography and general medical VLMs; code and weights are public.

Highlights and analysis are generated automatically and may contain errors. Check the original source.