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Self-Supervised Tree-level Biomass Estimation in Urban Environments From Airborne LiDAR and Optical Observations

Summary

Researchers developed a self-supervised framework using airborne LiDAR and optical imagery to estimate tree-level above-ground biomass in urban areas. The method achieved high accuracy in crown delineation and biomass estimation, revealing urban carbon stocks and changes over time without manual annotation.

SourcearXiv Computer VisionAuthor: Jose Bermudez (McMaster University, Hamilton, Ontario, Canada), Zilong Zhong (McMaster University, Hamilton, Ontario, Canada), Dominic Cyr (, Environment and Climate Change Canada, Montreal, Quebec, Canada), Camile Sothe (Planet Labs PBC, San Francisco, California, USA), Alemu Gonsamo (McMaster University, Hamilton, Ontario, Canada)
Self-Supervised Tree-level Biomass Estimation in Urban Environments From Airborne LiDAR and Optical Observations
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[2606.26194] Self-Supervised Tree-level Biomass Estimation in Urban Environments From Airborne LiDAR and Optical Observations

[Submitted on 24 Jun 2026]

Title:Self-Supervised Tree-level Biomass Estimation in Urban Environments From Airborne LiDAR and Optical Observations

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Abstract:Urban tree biomass remains less spatially explicitly quantified than biomass in managed forests because many estimates rely on inventories or coarse products that cannot resolve individual crowns or fine-scale heterogeneity. We present a crown-level above-ground biomass (AGB) framework for an 810~km$^2$ landscape in Ontario, Canada, using leaf-off airborne LiDAR (8--10~pulses~m$^{-2}$) and near-infrared RGB orthophotography (0.16--0.20~m) from 2018 and 2023. A dual-stream cross-attention network trained on rule-based pseudo-labels produced semantic marks for buildings, needleleaf trees, and deciduous trees, supporting crown delineation and functional-type assignment. On independently annotated withheld tiles, global/mean precision, recall, and Dice scores were 0.86, 0.83, and 0.84. Crowns were delineated with multiscale watershed segmentation in mapped tree areas, and AGB was estimated from a crown area--height power-law proxy calibrated to species-specific allometry (Lambert et al., 2005) for 21,921 inventory trees. For 18,713 inventory--segment matched pairs from a 90,726-tree held-out test set, AGB prediction achieved $R^2=0.609$ using inventory crown geometry and $R^2=0.570$ under operational segmentation, identifying crown delineation as the remaining uncertainty source. Aggregated to 30~m, estimates yielded total AGB stocks of 1.73~Tg in 2018 and 1.81~Tg in 2023 (811--850~Gg~C), local densities up to ${\sim}140$~Mg~ha$^{-1}$ along the Niagara Escarpment, and a net carbon gain of 39~Gg~C over five years. Deep-ensemble uncertainty maps highlighted high-epistemic-uncertainty areas linked to underrepresented land covers and guided assignment of uncertain crowns to a pooled allometric equation. The framework uses standard provincial data, requires no manual annotation, and produces a public bitemporal crown-level AGB database for trees outside forests at management-relevant resolution.

Subjects:

Computer Vision and Pattern Recognition (cs.CV); Machine Learning (cs.LG); Image and Video Processing (eess.IV)

MSC classes: 68T10

Cite as: arXiv:2606.26194 [cs.CV]

(or arXiv:2606.26194v1 [cs.CV] for this version)

https://doi.org/10.48550/arXiv.2606.26194

arXiv-issued DOI via DataCite (pending registration)

Submission history

From: Jose David Bermudez Castro [view email] [v1] Wed, 24 Jun 2026 15:02:39 UTC (42,554 KB)

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Key points and analysis

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Key points

  • Framework uses leaf-off airborne LiDAR and near-infrared orthophotography to estimate tree biomass at crown level.
  • Dual-stream cross-attention network with pseudo-labels achieved 0.84 Dice score for tree segmentation.
  • Biomass estimates for 810 km² in Ontario showed 1.73 Tg C in 2018 and 1.81 Tg C in 2023, with net gain of 39 Gg C.
  • Method relies on standard provincial data and produces public database for trees outside forests.

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