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LLM-AutoSciLab: Closed-Loop Scientific Discovery via Active Experimentation with LLMs

Proposes LLM-AutoSciLab, a closed-loop framework that combines hypothesis generation with hypothesis-conditioned experiment selection and mechanism refinement. It iteratively proposes plausible hypotheses, selects informative experiments, and updates state based on evidence. Introduces ActiveSciBench with 57 enzyme-kinetics tasks and 45 gene-regulatory-network tasks. Achieves 67.6% symbolic accuracy on NewtonBench, 35.1% on ActiveSciBench-Chem, and 31.1% exact graph recovery on ActiveSciBench-GRN, with 2-5x sample efficiency over baselines.

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Key points

  • LLM-AutoSciLab iteratively proposes hypotheses, selects informative experiments, and refines mechanisms in a closed loop.
  • Introduces ActiveSciBench, a benchmark with enzyme-kinetics and gene-regulatory-network tasks for evaluating active scientific discovery.
  • Outperforms prior methods with 2-5x sample efficiency and state-of-the-art accuracy across multiple benchmarks.

Why it matters

This matters because LLM-AutoSciLab iteratively proposes hypotheses, selects informative experiments, and refines mechanisms in a closed loop.

Technical impact

May affect model selection, inference cost, product capability, and evaluation benchmarks.

[2605.24043] LLM-AutoSciLab: Closed-Loop Scientific Discovery via Active Experimentation with LLMs

[Submitted on 21 May 2026]

Title:LLM-AutoSciLab: Closed-Loop Scientific Discovery via Active Experimentation with LLMs

View a PDF of the paper titled LLM-AutoSciLab: Closed-Loop Scientific Discovery via Active Experimentation with LLMs, by Sanchit Kabra and 4 other authors

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Abstract:Scientific discovery is a closed-loop process in which hypotheses guide data acquisition and observations refine the hypothesis space. Yet most approaches reduce discovery to supervised learning over fixed datasets, where limited observations can support multiple plausible mechanisms that fit locally but fail to generalize. Thus, the key challenge is selecting informative observations to resolve uncertainty, shifting the focus from static inference to adaptive data acquisition. To address this, we propose LLM-AutoSciLab, a closed-loop framework that couples hypothesis generation with hypothesis-conditioned experiment selection and mechanism refinement. Rather than fitting models to passively collected data, LLM-AutoSciLab iteratively proposes plausible hypotheses, selects informative experiments to distinguish or refine them, and updates its state using the resulting evidence. To evaluate dynamic, closed-loop scientific discovery with active data acquisition, we introduce ActiveSciBench, comprising two datasets: ActiveSciBench-Chem with 57 enzyme-kinetics tasks and ActiveSciBench-GRN with 45 gene-regulatory-network tasks. These datasets model discovery as a budget-constrained process requiring adaptive experiment design, variable selection, and recovery of true mechanisms. Across NewtonBench, ActiveSciBench-Chem, and ActiveSciBench-GRN, LLM-AutoSciLab outperforms prior methods, achieving 67.6% and 35.1% symbolic accuracy on NewtonBench and ActiveSciBench-Chem, respectively, and 31.1% exact graph recovery on ActiveSciBench-GRN. Moreover, hypothesis-guided experimentation is 2-5x more sample-efficient than the strongest competing baselines. Code and data are available at: this https URL

Subjects:

Machine Learning (cs.LG); Artificial Intelligence (cs.AI)

Cite as: arXiv:2605.24043 [cs.LG]

(or arXiv:2605.24043v1 [cs.LG] for this version)

https://doi.org/10.48550/arXiv.2605.24043

arXiv-issued DOI via DataCite (pending registration)

Submission history

From: Sanchit Kabra [view email] [v1] Thu, 21 May 2026 20:30:56 UTC (2,354 KB)

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